Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRRK-NTCQNFMEYFCISLAFVDLLLLV-NISIILYFRDFVLLSIRFTKYHICLFT---QIISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQ-NAYSRHCPFYVSI-------QSYWL--SFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETILYFPFSSHSSYTVRSKKIFLSKLIVCFLSTWLPFVLLQVIIVLLKV----QIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 2KS9 Chain:A ((31-318)) | -------------------QIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYA-V-HNEWYY-GLFYCKFHNFFPIAAVFASIYSM---TAVAFDRYMAIIHPLQPRLS--ATATKVVICVIWVLALLLAFP-Q-GY-YSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDR-----YHEQV-SAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290794 for 2055 contacts (-141.5/contact) +
2D Compatibility (PS) -27090 + (NN) -4889 + (LL) 2560
1D Compatibility (HY) -18400 + (ID) 1650
Total energy: -340263.0 ( -165.58 by residue)
QMean score : 0.226
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