Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPWNGSDGPEGAREPPWPALPPCDERRCSPFPLGALVPVTAVCLCLFVVGVSGNVVTVMLIGRYRDMRTT---TNLYLGSMAVSDLLIL-LGLPFDLYR-LWRSRPWVFGPLLCRLSLYVGEGCTYATLLHMTALSVERYLAICRPLRARVLVTRRRVRALIAVLWAVALLSAGPFLFLVGVEQDPGISVVPGLNGTARIASSPLASSPPLWLSRAPPPSPPSGPETAEAAALFSRECRPSPAQLGALRVMLWVTTAYFFL-PFLCLSILYGLIGREL----WSSRRPLRGPAASGRERGHRQTVRVLLVVVLAFIICWLPFHVGRIIYINTEDSR----MMYFSQYFNIVALQLFYLSASINPILYNLISKKYRAAAFKLLLARKSRPRGFHRSRDTAGEVAGDTGGDTVGYTETSANVKTMG |
| 4BV0 Chain:B ((20-316)) | --------------------------------------VLVTAIYLALFVVGTVGNGVTLFTLAR------LQSRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHPFKHKT-MSRSRTKKFISAIWLASALLAIPMLFTVGLQNLSGDGTHPG-----GLVCTPIVDT-------------------------------------ATLKVVIQLNTFMSFLFPMLVASILNTVIARRLTVMV--------------RVQALRRGVLVLRAMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACLCP------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244598 for 1965 contacts (-124.5/contact) +
2D Compatibility (PS) -26623 + (NN) -11851 + (LL) 3384
1D Compatibility (HY) -33200 + (ID) 5650
Total energy: -318538.0 ( -162.11 by residue)
QMean score : 0.327
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