Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLNSSAPGTPGTPAADPFQRAQAGLEEALLAPGFGNASGNASERVLAAPSSELDVNTDIYSKVLVTAVYLALFVVGTVGNTVTAFTLARKKSLQSLQSTVHYHLGSLALSDLLTLLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAVPMLFTMGEQNRSADGQHAGGLVCTPTIHTATVKVVIQVNTFMSFIFPMVVISVLNTIIANKLTVMVRQAAEQGQVCTVGGEHSTFSMAIEPGRVQALRHGVRVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTPFLYDFYHYFYMVTNALFYVSSTINPILYNLVSANFRHIFLATLACLCPVWRRRRKRPAFSRKADSVSSNHTLSSNATRETLY |
| 4BV0 Chain:B ((6-328)) | -------------------------------------------------PNSDLDVNTDIYSKVLVTAIYLALFVVGTVGNGVTLFTLAR------LQSRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHPFKHKT-MSRSRTKKFISAIWLASALLAIPMLFTVGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQLNTFMSFLFPMLVASILNTVIARRLTVMV--------------------------RVQALRRGVLVLRAMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACLCP---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -237449 for 2313 contacts (-102.7/contact) +
2D Compatibility (PS) -30607 + (NN) -8260 + (LL) 6056
1D Compatibility (HY) -55600 + (ID) 12450
Total energy: -338310.0 ( -146.26 by residue)
QMean score : 0.400
|
|
|