Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVSGNTLTILLICIDPQLHT-PMYFLLSQLSLMDLMHVSTIILKMATNYL-SGKKSISFVGCATQHFLYLCLGGAECFLLAVMSYDRYVAICHPLRY-AVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCEFPAVVKLVCGDITVYETTVYISSILLLLPIFLISTSYVFILQSVIQMRSSGSKRNAFATCGSHLTVVSLWFGACIFSYMRPRSQCTLLQNKVGSVFYSIITPTLNSLIYTLRNKDVAKALRRVLRRDVITQCIQRLQLWLPRV |
| 4U16 Chain:B ((13-160)) | ------------------------VFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLS-LACADLI-IGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIG-LAWVISFV--LWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKMNIFEMLRIDEGGGSGGDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120599 for 896 contacts (-134.6/contact) +
2D Compatibility (PS) -15048 + (NN) -10038 + (LL) 1948
1D Compatibility (HY) -16400 + (ID) 2400
Total energy: -162537.0 ( -181.40 by residue)
QMean score : 0.137
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