Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MITFLPIIFSILVVVTFVIGNFANGFIALVNSTEWVKRQKISFADQIVTALAVSRVGLLWVLLLNWYSTVLNPAFCSVELRTTAYNIWAVTGHFSNWPATSLSIFYLLKI-ANFSNLIFLRLKRRVKSVILVVLL--GPLLFLACHLFVVNMN-QIVWTKEYEGNMTWKIKLRRAMYLSDTTVTMLANLVPFTVTLISFL------LLVCSLCKHLKK---MQLHGKGSQDPSTKVHIKVLQTVISFFLLRAIYFVSVIISVWSFKNLENKPVFMFCQ--------AIGFSCSSAH---PFILIWGNKKLKQTYLSVLWQMRY |
| 3QS7 Chain:E ((56-411)) | AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFGVVSMVILKMTETQAGEYLLFIQSTNYTILFTVSIRTLRRPYFRKMENQDA----LVCISESVPEPIVEWVLCVVKKE----EKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENK-------ALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATEDYEIDQYEE---FCFSVRFKAYPQIRCTWTFSRKSFP-----CEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205558 for 1728 contacts (-119.0/contact) +
2D Compatibility (PS) -29602 + (NN) 8227 + (LL) 3240
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -237043.0 ( -137.18 by residue)
QMean score : 0.112
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