Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTIYFVSSNTERSVYLSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLLKRNISPKIPRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNISEGILSLVVSLVLSSSLQFIINVTSASLLIHSLRRHIQKMQKNATGFWNPQ---TEAHVGAMKLMVYFLILYIPYSVATLVQYLPFYAGMDMGTKSICLIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
| 2LUV Chain:A ((1-35)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5843 for 124 contacts (47.1/contact) +
2D Compatibility (PS) -3327 + (NN) 485 + (LL) 24480
1D Compatibility (HY) -400 + (ID) 300
Total energy: 26781.0 ( 215.98 by residue)
QMean score : 0.137
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