Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------ACEV-GQLTVCMP------AITTGAKPSDACCGN------LRAQQACF-CQY-AKDPSLARYITSPHARETLVSCGLAVPHC-
2QSB Chain:A ((5-89))
VRVDQNLFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNV-----PAHGRTDLYTIISKLEALS
General information:
TITO was launched using:
RESULT:
Template:
2QSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29783 for 388 contacts (-76.8/contact) +
2D Compatibility (PS) -6535 + (NN) -2474 + (LL) 592
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -41700.0 ( -107.47 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_2QSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QSB-query.scw
PDB file :
Tito_Scwrl_2QSB.pdb
: