Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------QCNAGNLAVCASPI-----------VSGTPPSKTCCNNLKSQRGCFCQ---FAHNRAYSSYINS--PNARKTLVSCGVPVPKC
1MOL Chain:A ((1-94))
GEWEIIDIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEREIKGYEYQLYVYASDKLFRADISEDYKTRGRKLLRFNGPVPPP
General information:
TITO was launched using:
RESULT:
Template:
1MOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19903 for 362 contacts (-55.0/contact) +
2D Compatibility (PS) -6992 + (NN) -1805 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -31900.0 ( -88.12 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_1MOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MOL-query.scw
PDB file :
Tito_Scwrl_1MOL.pdb
: