Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPPPVQCDPGKLSACAVPIFFGTAPSKSCCSNLRAQE-KDGCFCQYARDP---MYASY-------INSTNARNTIAACGIAFPSC
3OB4 Chain:A ((427-485))
-------------------------HQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8651 for 258 contacts (-33.5/contact) +
2D Compatibility (PS) -4454 + (NN) 2755 + (LL) 952
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -11148.0 ( -43.21 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: