Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCNAGQLAICAGAIIGGSTPSASCCSNLRAQRG-CFCQYARNPAYASYINSANARKTLTSCGIAIPRC
1ZJQ Chain:A ((1-34))
--------GCGGLMAGCDGKSTFCCSGYNCSPTWKWCVYARP--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17026 for 183 contacts (-93.0/contact) +
2D Compatibility (PS) -3452 + (NN) -529 + (LL) 1984
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -21573.0 ( -117.89 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_1ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZJQ-query.scw
PDB file :
Tito_Scwrl_1ZJQ.pdb
: