Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPGGCVPQL--NRLLACRAYLVP----G--AADP----S-------ADCCSALSSI--SRDCACSTMG---------------------IINSIPSRCNIGRVN-CSA
1W2Q Chain:A ((14-118))
---SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37107 for 330 contacts (-112.4/contact) +
2D Compatibility (PS) -6491 + (NN) -1786 + (LL) -16
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -51400.0 ( -155.76 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: