Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRASADRVALRLAPCVSAADDPQSTPTSSCCSAVHAIGQSPSCLCAVMLSGTA----R--AAG-----IKPEVAITIPKRCNMADRPVGYKCGDYTLP
2DS2 Chain:B ((7-63))
------------------------------LRQCCNQLRQV--DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31018 for 231 contacts (-134.3/contact) +
2D Compatibility (PS) -4687 + (NN) -1601 + (LL) 1428
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -39628.0 ( -171.55 by residue)
QMean score : 0.194
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: