Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVTPCVAYGL----GRAP-------IAPCCRALNDLRFVNTRNLRRAACRCLVGVVNRNP-------G---LRR-------N--PRFQNI--PRDCRNTFVRPFWWRPRIQCGRIN
1BEA Chain:A ((15-108))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI-------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLAT----------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57754 for 368 contacts (-156.9/contact) +
2D Compatibility (PS) -5968 + (NN) -54 + (LL) 1876
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -64550.0 ( -175.41 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: