Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCGQVSSNLAPCIAYVR----GGGA-V-----PPACCNGIRNINNLAKTTADRQTACNCLKQLSASVP-------G---VN----------ANNAAAL--PGKCGVNVPYKISPSTNCATVK
1BEA Chain:A ((15-109))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40273 for 386 contacts (-104.3/contact) +
2D Compatibility (PS) -6750 + (NN) -2167 + (LL) 1512
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -53278.0 ( -138.03 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: