Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ANPCNPA--QLTPCAGPALFGGAVPPACCAQLRA-----------QQGCLCGYARSPNYGSY--IRSPNAARLFAICNLPMPRCR
2ALG Chain:A ((1-79))
MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31226 for 386 contacts (-80.9/contact) +
2D Compatibility (PS) -6511 + (NN) -1481 + (LL) 268
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -44150.0 ( -114.38 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: