Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GGVVEICNVSKDDLMPCKPAVTQ---PPAQP---VQACCSVLSTANLTCFCEFGNNYPS----LLRMFG---------IDPDLAKALPGECKLNSPPGC
1HSS Chain:A ((11-106))
-------AFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30767 for 424 contacts (-72.6/contact) +
2D Compatibility (PS) -6913 + (NN) -3371 + (LL) 728
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -43723.0 ( -103.12 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: