Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVT----PPNPTAP----SADCCSALSHADLNCLCSYKNSNL------LPS------LG--------IDPKLAMQL--PGKCKLPHPANC
1BEA Chain:A ((11-110))
-----AIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS--
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21291 for 423 contacts (-50.3/contact) +
2D Compatibility (PS) -7232 + (NN) -5646 + (LL) 380
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -38339.0 ( -90.64 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: