Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSDCTNVLISMSPCLNYITGNSS--TP-------SSQCCTQLASVVRSSPQCLCQVLNGGGSS---------------L-G--IEV--NKTQAIALPGACNVQTPPISSCN
1B1U Chain:A ((16-109))
---------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46271 for 421 contacts (-109.9/contact) +
2D Compatibility (PS) -6482 + (NN) -2296 + (LL) 1004
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -59195.0 ( -140.61 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: