Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCDPEQLVACASPIFYGTAPSESCCSNLREQ-QKEGCLCQYAKDPMYASY----------VNNTNARKTIAACGIPIP-SC
3OB4 Chain:A ((427-488))
-------------------HQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9485 for 280 contacts (-33.9/contact) +
2D Compatibility (PS) -4965 + (NN) 997 + (LL) 1180
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -14523.0 ( -51.87 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: