Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------APCEVGQLTVCMPAITTGAKPSGACCANLGAQQGCFCQYAKDPALGRYITSPHARDTLLSCGLA-VPRC--------------
3FBI Chain:B ((19-110))
QNPLPTRFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEYWCNPPYSQCIVYPNCLFILKLLNGFMESAIVNEDGLLEGLDELP
General information:
TITO was launched using:
RESULT:
Template:
3FBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23009 for 385 contacts (-59.8/contact) +
2D Compatibility (PS) -6740 + (NN) 1198 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -30951.0 ( -80.39 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_3FBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBI-query.scw
PDB file :
Tito_Scwrl_3FBI.pdb
: