Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDCSNAMDKLAPCTSAVGLSSNGVKPSSECCDALKGTSTSCVCKSVR-----------------------AVISLPAKCNLPA-LTCSGSR
2DS2 Chain:B ((8-70))
---------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACPFR-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21667 for 207 contacts (-104.7/contact) +
2D Compatibility (PS) -4228 + (NN) -2934 + (LL) 796
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -31933.0 ( -154.27 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: