Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATAESLSPCASAVGNNPQDPTPECCAVLQTANVD----------CICALVQST----------MQLPSECGLETP---------QCPSD
1BWO Chain:A ((1-90))
--IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCG--VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17294 for 369 contacts (-46.9/contact) +
2D Compatibility (PS) -6757 + (NN) -8143 + (LL) 492
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -34902.0 ( -94.59 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: