Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ETSLLAPSCADVTKAVAPCLNFLKGKGGADPSQACCDGARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCSKAVSSIMPKSL
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSG-PSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYT-ISTSTDCSRVN--------
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36518 for 669 contacts (-54.6/contact) +
2D Compatibility (PS) -9809 + (NN) -4262 + (LL) 692
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -57897.0 ( -86.54 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: