Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ESNNCSKGANYFFPCINYVGGFSP-KPAKDCCSGLEELNKMAKEKEGPENICQCIEDM-AYVTNVPFIASRVQSLPEDCHIHLSFPISISMNCSRV
2RKN Chain:A ((2-75))
-IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--------DFACLCGYKNSPWLGS--FGVDPELASALPKQCGLANAP-----------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40880 for 489 contacts (-83.6/contact) +
2D Compatibility (PS) -7340 + (NN) -1162 + (LL) 1408
1D Compatibility (HY) -400 + (ID) 600
Total energy: -48974.0 ( -100.15 by residue)
QMean score : 0.116
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: