Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDCTTVTGLLSTCSAFITYGSPDPYPGSPCCDAVMNLNLIADSTDNRKSVCGCL--MGL-ITTYNPNSTAIATLPGFCGVALGFTIDPNTDCNFVPLF
1L6H Chain:A ((7-66))
--------QLTVCTGAIAGGA---RPTAACCSSLRA-----------QQGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP---------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42099 for 376 contacts (-112.0/contact) +
2D Compatibility (PS) -5893 + (NN) -307 + (LL) 1132
1D Compatibility (HY) 0 + (ID) 750
Total energy: -47917.0 ( -127.44 by residue)
QMean score : 0.046
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: