Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSDVIKDLRPCVNYLVNG---TG---K---------------PPSACCAGASALASAASSSSDKKAACECIKSAAKNM---K---P-----NAQLAQALPANCGINLPVTIAPNVDCSKVG
1PSY Chain:A ((25-116))
--------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVK------QV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV----------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19307 for 411 contacts (-47.0/contact) +
2D Compatibility (PS) -6589 + (NN) -5741 + (LL) 1892
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -33045.0 ( -80.40 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: