Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDPITPGPTIADCSPRL--VALMPCAPFVQGT------AQMP-----------AQSCCDNLNQLYTLQPGCLCLLLNDT---T---LSDFPI--N-RTRALQLPVLCKLQANASACSEID
1W2Q Chain:A ((14-112))
----------SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR----------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45980 for 419 contacts (-109.7/contact) +
2D Compatibility (PS) -7007 + (NN) -1003 + (LL) 600
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -58390.0 ( -139.36 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: