Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QINTPCSPSMLSTFTPCINFLR----NSTANGTS-------PTADCCKSLQTLTSGGRDCLCLIVTGSV--------PF-Q---IPINRTLAISLPRACNMPGVPVQCKV
2LVF Chain:A ((17-106))
------------MLSHCRMYMRQQMEEST-YQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMR-LAENIPSRCNLS--PMRCP-
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33941 for 380 contacts (-89.3/contact) +
2D Compatibility (PS) -6793 + (NN) 368 + (LL) 632
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -45434.0 ( -119.56 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: