Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPNEL--NRLNVCAPFVVP----GVPEATP----S-------SDCCAALQSV--QHDCLCNTLR---------------------IASRLPSRCNIPALS-CGVQINA
1W2Q Chain:A ((14-118))
SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD-----
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38243 for 341 contacts (-112.1/contact) +
2D Compatibility (PS) -6570 + (NN) -2312 + (LL) 580
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -52595.0 ( -154.24 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: