Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQL--VALSTCIPFVGGNT------KVP-----------DSTCCTNLRKKINQTKKCLCLLVADRNDPD---L-G----FKVNATLALILPSICHAPSNASECPAEANKSSQ
1W2Q Chain:A ((15-118))
-------SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFK-RELMSLPQQCNFRA-PQRCD--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45005 for 490 contacts (-91.8/contact) +
2D Compatibility (PS) -7534 + (NN) -1757 + (LL) 804
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -57892.0 ( -118.15 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: