Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASTPSSNCESAQMKLVPCLTYVTGSDSKPPTECCSGLKDLNTNNPTCLCQLITQLNSTSS---GSS---NVNVAKVLALPRDCSVTLITSDCPGKDLL
3OB4 Chain:A ((429-489))
------------------------------ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP-QRCD-----
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31027 for 306 contacts (-101.4/contact) +
2D Compatibility (PS) -5857 + (NN) -4498 + (LL) 1028
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -44154.0 ( -144.29 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: