Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSTDLSPYKPCLPAVM----GTTPPS----PTKECCIAVKSADILCLCEAVGTTE-----L------------PG--LN----KEAALTLPQRCGAVAFSTRVCGSK
1B1U Chain:A ((11-110))
--AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33698 for 429 contacts (-78.6/contact) +
2D Compatibility (PS) -7046 + (NN) -2611 + (LL) 412
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -44943.0 ( -104.76 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: