Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAKVMPSRQCCSNIAGMGKGLPGAKCLCSLLSHP---LA-RSQG-----VAPRIALGIPQKCRIAVPRGFVCQGIRVPGS
3OB4 Chain:A ((428-489))
----------------------QERCCNELNEFEN---NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--QRCD-------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34481 for 292 contacts (-118.1/contact) +
2D Compatibility (PS) -5509 + (NN) -1270 + (LL) 1256
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -42304.0 ( -144.88 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: