Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACNAMTLQPCLAASQG----KVA---PDPACCTAIKNIGLSADGPQCLCTLATGPLAK---ANGV----------SADAAMAIPKKCGLPVPKGFMCNNKPVPGS
1HSS Chain:A ((16-103))
-----ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI-----SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI--------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35557 for 368 contacts (-96.6/contact) +
2D Compatibility (PS) -6057 + (NN) -1478 + (LL) 300
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -46642.0 ( -126.74 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: