Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVAAQCDAGQLVVCAPAILGGAMPTASCCSKLR---EQEQQGCFCEYLRNPAYAGYINSQTARGAIAA-CNVTLP---QCS--
1HYP Chain:? ((6-80))
----PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA---LGILNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33229 for 402 contacts (-82.7/contact) +
2D Compatibility (PS) -6849 + (NN) 174 + (LL) 820
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -45134.0 ( -112.27 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: