Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSDVCTVVSPVLESCYIALQSGESFMKSESVCCKSL--EILENRIRDSDHQFTRYAVCE---CFKASDNDKQVLVNENLLEVQVLCGPHVPYPITSYSDCLQYAD-EEIARTAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3V97 Chain:A ((1-703)) | AMNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGESEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADL----------------PEYNVAVDRYADWVVVQEYAHKARQRLFDIIAATISVLGIAPNKLVLKTREEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 643 for 465 contacts (1.4/contact) +
2D Compatibility (PS) -9831 + (NN) -4352 + (LL) 1644
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -17746.0 ( -38.16 by residue)
QMean score : 0.042
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