Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGLGID-------ATVCLCTAIHLKVLGL-NVDIPLALKLLVTCGRELP----NGLTC
1T12 Chain:A ((7-87))
---------------VTSNLAPCLAYLRN-----TG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDC
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63121 for 465 contacts (-135.7/contact) +
2D Compatibility (PS) -7093 + (NN) -3315 + (LL) 1448
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -74031.0 ( -159.21 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: