Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTTCDNNINGILSNCKSTNPSPACCSFMRKITLECVCPRITSDVTKYI--------SLS----SILTIAKICHRTLPHQYQCGSYLLP
1SM7 Chain:A ((45-103))
--------------------REQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGT---------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33730 for 265 contacts (-127.3/contact) +
2D Compatibility (PS) -4361 + (NN) 2089 + (LL) 368
1D Compatibility (HY) -800 + (ID) 350
Total energy: -36784.0 ( -138.81 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: