Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCTSQLAPVAPCLDYVQ----G-NGKTP----SSDCCKGLSSLVTTSPVCLCQLSEGKLNLS--A---------LG------VTVDMKRALSL--PTVCKIKGAD-RSRCAGKLSIP
1BEA Chain:A ((16-120))
---------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG--
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36861 for 500 contacts (-73.7/contact) +
2D Compatibility (PS) -7815 + (NN) -2720 + (LL) 1140
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -51556.0 ( -103.11 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: