Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTF--MSVLSCQSATMSESTM------P-----------SPACCAALRKFH-DADCLCQVLLSA-RSA-AAIANVPF--N-LKAALEIPMKCALRTVSAPPGYSCGGMVVPRSPPPTST
1W2Q Chain:A ((15-112))
-----SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR------------------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44731 for 459 contacts (-97.5/contact) +
2D Compatibility (PS) -7674 + (NN) -4110 + (LL) -188
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -61653.0 ( -134.32 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: