Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMSGEGLMACKPAVS----PPNPAPP----SAACCSALSHADMHCLCSYRNSKLLP------S-MG----ID---------PNLALQL--PKKCKFPNAAHC
1BEA Chain:A ((11-109))
----AIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23349 for 407 contacts (-57.4/contact) +
2D Compatibility (PS) -7366 + (NN) -6780 + (LL) 676
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -39919.0 ( -98.08 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: