Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVLIGMAPCLNYIT-----GSSSSP----SSSCCSQLASVVQSQPRCLCVALN----GGGAALGI---------------TINRTLALAL--PGACNVQTPPVSQCDAA
1BEA Chain:A ((16-109))
---------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI--------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44353 for 347 contacts (-127.8/contact) +
2D Compatibility (PS) -6609 + (NN) -3672 + (LL) 1348
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -58236.0 ( -167.83 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: