Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SQVNAPCTWTEISEEYDYCGDSLTRG----VPWVS---PLKVCCDTIKLNKMKCICQVVTKTFSQNF-------------D-------F--YKLSKL--SHACGDLLVPGSYCGGNYH
1BEA Chain:A ((18-112))
----------------PSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGV-------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27152 for 379 contacts (-71.6/contact) +
2D Compatibility (PS) -6220 + (NN) 900 + (LL) 964
1D Compatibility (HY) -800 + (ID) 550
Total energy: -32858.0 ( -86.70 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: