Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SPIKVVGAKKELPFCNLDLLACVQPFLVNGHGGKLPKGCCEKMKKSTSCMCRFLTAKE--QNLNAAAHRIFWFCHISVPNCPKI
1HCR Chain:A ((1-52))
------GRPRAI---NKHEQEQISRLLEKGHP---RQQLAIIFGIGVSTLYRYFPASSIKKRMN--------------------
General information:
TITO was launched using:
RESULT:
Template:
1HCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22184 for 265 contacts (-83.7/contact) +
2D Compatibility (PS) -5064 + (NN) -77 + (LL) 2232
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -27143.0 ( -102.43 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_1HCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HCR-query.scw
PDB file :
Tito_Scwrl_1HCR.pdb
: