Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEHLNLFSLENSDYIYADYNATFPVSDSVKESILEVLSKQ--VLNPSSL-HRKGQEARRILQDARDNIRSAIGVPSNKEIVFTSGATEANSLVMKGIAGF-----QHVI-SAVEHPSILNSACN---------PHIIPVNQGGIVDLLALERILSELKGNRVIVSVMMANNETGVVQPVKEIAEIAHKFETIYHTDAAQSVGKIKVNMEDLGMDLLTLSAHKFGGIAGSGVLIFNKD--LVIEPIIVGGGQEKGLRGGTENIVAIAGLSAALQ-SISNLLSKMDEIKELRDQLEYELLNLASGIKIFGKNSKRLPNTSLIYMPGVKSDVQLMNFDLNNIAVSNGSACSSGKVEPSHVLLAMGATREQAECSIRVSIGPQTKPRDIRKIVDCWYNIYEKNILDMRK |
| 3LVJ Chain:B ((24-390)) | ----------------IYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP-REIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDT-CRQLEREGFEVTYLAP-QRNGIIDLKELE---AAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEE-VYLNGDLEHGAPNILNVSFNYVEGESLIMA--LKDLAVSSGSAC----LEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170827 for 2962 contacts (-57.7/contact) +
2D Compatibility (PS) -37854 + (NN) -15811 + (LL) 1440
1D Compatibility (HY) -24000 + (ID) 6400
Total energy: -253452.0 ( -85.57 by residue)
QMean score : 0.497
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