Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVFLNNATKKIEGE-YHQSK--ETNAPVVLILHHHPQYGGSMDSKMIHSIYTSFIDNNFSALKINFRGVGKSTGTFDKGIGELTDAAIAIDWLQEHNPSNVPIWIVGFSFGAWVAMQLTMRRPEIVGFIALSLPATKYDFSFLSPCPVPGLIIQSSNDTISEESDVTELANRLINSVKSDHMEYHIIGDTNHFLRDK----EEEVTQIIDNYVKLRLNSAAISSQMVKKEIRIKEYA
2FUK Chain:A ((12-217))
--ALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR-PTDTLWLAGFSFGAYVSLRAAAALE-PQVLISIAPPAGRWDFSD-VQPPAQWLVIQGDADEIVDPQAVYDWLET-LE----QQPTLVRMPDTSHFFHRKLIDLRGALQHGVRRWLPATP--------------------
General information:
TITO was launched using:
RESULT:
Template:
2FUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125336 for 1736 contacts (-72.2/contact) +
2D Compatibility (PS) -21711 + (NN) -8361 + (LL) 3020
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -163138.0 ( -93.97 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2FUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FUK-query.scw
PDB file :
Tito_Scwrl_2FUK.pdb
: