Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEEKIPKNKQEQLGQPKIPVSSQVSNTQNNNQQPNLQSENGSKLPIAAASMLAITGIAFRGSYCSL---PRNVSSRNSNRGLLSCCYYNPISL
2LG6 Chain:A ((1-36))
---------------------------------------------------------LFCKGGSCHFGGCPSHLIKVGSCFGFRSCCAWPWNA-
General information:
TITO was launched using:
RESULT:
Template:
2LG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11108 for 204 contacts (-54.5/contact) +
2D Compatibility (PS) -3682 + (NN) -2335 + (LL) 2992
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -16533.0 ( -81.04 by residue)
QMean score : 0.165
(partial model without unconserved sides chains):
PDB file :
Tito_2LG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LG6-query.scw
PDB file :
Tito_Scwrl_2LG6.pdb
: