Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSGIMQGKYEFLNEENTKVFEVTIPSFSLDSPYTNIRPH
1XVS Chain:A ((2-124))
-----DVSLPCIKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLMIDE-QGESFTVEIEPFRLAVPHV-----
General information:
TITO was launched using:
RESULT:
Template:
1XVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45639 for 841 contacts (-54.3/contact) +
2D Compatibility (PS) -13543 + (NN) -4266 + (LL) 864
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -72334.0 ( -86.01 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1XVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XVS-query.scw
PDB file :
Tito_Scwrl_1XVS.pdb
: