Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKIGFLAVF-----------ALVISSQIGSGIFMLPISLAPYSTYSLISWA-ISGFGAVSLALVF-ATLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYW----VISWVST-----TALIVVGVGYLTPFL--------HEEIKN------IHLFLELLL------FTIITLINLRGVATAGRVEFLLTVIKI----------AVLLAIPVMALFFFNRNNFIISKEMSSLTISQILARSTLLTLW----CFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIM-GLINGNDLANSRAPYVDAIKIMFSGNWHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSII----------------------------DFSVVSFLFVYLACSL---AFLKVVIKERNYHKLLTGSIATTFCCWVILETSINTLLI--ASLFTTSGIPLYLFWYRRASAQ----------------------------------------------------------------------------------------------------- |
| 3J16 Chain:B ((1-608)) | MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLPTNLEAHVTHR--YSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYIKILQLENVLKRDIEKLS-GGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDG----HIPAENLRFRTEALQFRIADATEDLQNDSASRAFSYPSLKKTQGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEV-QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNYFFLDNTGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -356942 for 2944 contacts (-121.2/contact) +
2D Compatibility (PS) -42852 + (NN) 2793 + (LL) 832
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -410869.0 ( -139.56 by residue)
QMean score : 0.108
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