Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISSQIGSGIFMLPISLAPYGTYSLISWAVSGLGAILLALVFALLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWASSWVSSTAVIVASIGYLAPLFHNNIQNIRLFLEIALILAIMLINLRGITTVGHVELLLMTVKITVLFAVPIAALLLFDRNNFVVSEEISNLTISQAFARSTLLTLWCFIGLEIVTASAGSVENPSKTI----PRAIVFGTVFVAIIYFINSLAIMGLINGNHLANSKAPYADVIKIILPGNWYLIISIVAFIVSVSSLNAWFLADGQVALGLAKDKLMPQFFAKRNKYGAPFCGIIINTLGILALLVLISSKNFAKQVTSIIDVSVVSFLFVYLTCCLAFLKVIIQEKNYYKFLIGGMAVLFCCWIIYETPMNTLLIASLFPLSGTPTYLLWYRKPTK |
1B04 Chain:A ((2-313)) | -DRQQAERRAAELRELLNRYGYEYYVL-----DRPSVPDAEYDRLMQELIAIEEQYPELKTSDSPTQR--IGGPPLE-AFRKVA--------------HRV----------------PMMSLANAFGEGDLRDFDRRVRQEVG-EAAYVCELAIDGLAVSVRYEDGYFVQGATRGDGT--------TGEDITENLKTIRSLPLRLKEPV-SLEARGEAFMPKASFLRLNEERKAR--ELFANPRNAAAGSLR-------------------------------QLDPKVAASRQLDLFVYGLAD-AEAL--GIASHSEALDYLQALG-----------FKVNPERRRCANIDEVIAFVSEWHDKRPQLPYEIDGIVIKV---------DSFAQQRALGATAKSPRWAIAYKFPAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243274 for 2404 contacts (-101.2/contact) +
2D Compatibility (PS) -31045 + (NN) 3205 + (LL) 9820
1D Compatibility (HY) 4800 + (ID) 2150
Total energy: -258644.0 ( -107.59 by residue)
QMean score : 0.138
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